balance: transformations and formulas¶
This tutorial focuses on the ways transformations, formulas and penalty can be included in your pre-processing of the covariates before adjusting for them.
Example dataset - preparing the objects¶
The following is a toy simulated dataset.
For a more basic walkthrough of the elements in the next code block, please take a look at the tutorial: balance Quickstart: Analyzing and adjusting the bias on a simulated toy dataset
from balance import load_data
target_df, sample_df = load_data()
from balance import Sample
sample = Sample.from_frame(sample_df, outcome_columns=["happiness"])
target = Sample.from_frame(target_df, outcome_columns=["happiness"])
sample_with_target = sample.set_target(target)
sample_with_target
INFO (2026-02-21 04:46:32,220) [__init__/<module> (line 72)]: Using balance version 0.16.1
WARNING (2026-02-21 04:46:32,401) [input_validation/guess_id_column (line 337)]: Guessed id column name id for the data
WARNING (2026-02-21 04:46:32,413) [sample_class/from_frame (line 549)]: No weights passed. Adding a 'weight' column and setting all values to 1
WARNING (2026-02-21 04:46:32,424) [input_validation/guess_id_column (line 337)]: Guessed id column name id for the data
balance (Version 0.16.1) loaded:
š Documentation: https://import-balance.org/
š ļø Help / Issues: https://github.com/facebookresearch/balance/issues/
š Citation:
Sarig, T., Galili, T., & Eilat, R. (2023).
balance - a Python package for balancing biased data samples.
https://arxiv.org/abs/2307.06024
Tip: You can view this message anytime with balance.help()
WARNING (2026-02-21 04:46:32,439) [sample_class/from_frame (line 549)]: No weights passed. Adding a 'weight' column and setting all values to 1
(balance.sample_class.Sample)
balance Sample object with target set
1000 observations x 3 variables: gender,age_group,income
id_column: id, weight_column: weight,
outcome_columns: happiness
target:
balance Sample object
10000 observations x 3 variables: gender,age_group,income
id_column: id, weight_column: weight,
outcome_columns: happiness
3 common variables: gender,age_group,income
When trying to understand what an adjustment does, we can look at the model_coef items collected from the diagnostics method.
adjusted = sample_with_target.adjust(
# method="ipw", # default method
# transformations=None,
# formula=None,
# penalty_factor=None, # all 1s
# max_de=None,
)
adj_diag = adjusted.diagnostics()
adj_diag.query("metric == 'model_coef'")
INFO (2026-02-21 04:46:32,460) [ipw/ipw (line 703)]: Starting ipw function
INFO (2026-02-21 04:46:32,462) [adjustment/apply_transformations (line 433)]: Adding the variables: []
INFO (2026-02-21 04:46:32,463) [adjustment/apply_transformations (line 434)]: Transforming the variables: ['gender', 'age_group', 'income']
INFO (2026-02-21 04:46:32,472) [adjustment/apply_transformations (line 469)]: Final variables in output: ['gender', 'age_group', 'income']
INFO (2026-02-21 04:46:32,481) [ipw/ipw (line 738)]: Building model matrix
INFO (2026-02-21 04:46:32,593) [ipw/ipw (line 764)]: The formula used to build the model matrix: ['income + gender + age_group + _is_na_gender']
INFO (2026-02-21 04:46:32,593) [ipw/ipw (line 767)]: The number of columns in the model matrix: 16
INFO (2026-02-21 04:46:32,594) [ipw/ipw (line 768)]: The number of rows in the model matrix: 11000
INFO (2026-02-21 04:46:49,303) [ipw/ipw (line 990)]: Done with sklearn
INFO (2026-02-21 04:46:49,304) [ipw/ipw (line 992)]: max_de: None
INFO (2026-02-21 04:46:49,304) [ipw/ipw (line 1014)]: Starting model selection
INFO (2026-02-21 04:46:49,307) [ipw/ipw (line 1047)]: Chosen lambda: 0.041158338186664825
INFO (2026-02-21 04:46:49,308) [ipw/ipw (line 1065)]: Proportion null deviance explained 0.172637976731583
INFO (2026-02-21 04:46:49,314) [sample_class/diagnostics (line 1827)]: Starting computation of diagnostics of the fitting
INFO (2026-02-21 04:46:49,641) [sample_class/diagnostics (line 2073)]: Done computing diagnostics
| metric | val | var | |
|---|---|---|---|
| 52 | model_coef | 0.138619 | intercept |
| 53 | model_coef | 0.043944 | _is_na_gender[T.True] |
| 54 | model_coef | -0.203732 | age_group[T.25-34] |
| 55 | model_coef | -0.428683 | age_group[T.35-44] |
| 56 | model_coef | -0.529556 | age_group[T.45+] |
| 57 | model_coef | 0.332490 | gender[T.Male] |
| 58 | model_coef | 0.043944 | gender[T._NA] |
| 59 | model_coef | 0.169578 | income[Interval(-0.0009997440000000001, 0.44, ... |
| 60 | model_coef | 0.154197 | income[Interval(0.44, 1.664, closed='right')] |
| 61 | model_coef | 0.111212 | income[Interval(1.664, 3.472, closed='right')] |
| 62 | model_coef | -0.041457 | income[Interval(11.312, 15.139, closed='right')] |
| 63 | model_coef | -0.161148 | income[Interval(15.139, 20.567, closed='right')] |
| 64 | model_coef | -0.211197 | income[Interval(20.567, 29.504, closed='right')] |
| 65 | model_coef | -0.357491 | income[Interval(29.504, 128.536, closed='right')] |
| 66 | model_coef | 0.093738 | income[Interval(3.472, 5.663, closed='right')] |
| 67 | model_coef | 0.072936 | income[Interval(5.663, 8.211, closed='right')] |
| 68 | model_coef | 0.005787 | income[Interval(8.211, 11.312, closed='right')] |
As we can see from the glm coefficients, the age and gender groups got an extra NA column. And the income variable is bucketed into 10 buckets.
We can change these defaults by deciding on the specific transformation we want.
Let's start with NO transformations.
The transformation argument accepts either a dict or None. None indicates no transformations.
adjusted = sample_with_target.adjust(
# method="ipw",
transformations=None,
# formula=formula,
# penalty_factor=penalty_factor,
# max_de=None,
)
adj_diag = adjusted.diagnostics()
adj_diag.query("metric == 'model_coef'")
INFO (2026-02-21 04:46:49,659) [ipw/ipw (line 703)]: Starting ipw function
INFO (2026-02-21 04:46:49,661) [ipw/ipw (line 738)]: Building model matrix
INFO (2026-02-21 04:46:49,739) [ipw/ipw (line 764)]: The formula used to build the model matrix: ['income + gender + age_group + _is_na_gender']
INFO (2026-02-21 04:46:49,740) [ipw/ipw (line 767)]: The number of columns in the model matrix: 8
INFO (2026-02-21 04:46:49,741) [ipw/ipw (line 768)]: The number of rows in the model matrix: 11000
INFO (2026-02-21 04:47:05,940) [ipw/ipw (line 990)]: Done with sklearn
INFO (2026-02-21 04:47:05,941) [ipw/ipw (line 992)]: max_de: None
INFO (2026-02-21 04:47:05,942) [ipw/ipw (line 1014)]: Starting model selection
INFO (2026-02-21 04:47:05,944) [ipw/ipw (line 1047)]: Chosen lambda: 0.0368353720078807
INFO (2026-02-21 04:47:05,945) [ipw/ipw (line 1065)]: Proportion null deviance explained 0.17354102148345973
INFO (2026-02-21 04:47:05,952) [sample_class/diagnostics (line 1827)]: Starting computation of diagnostics of the fitting
INFO (2026-02-21 04:47:06,276) [sample_class/diagnostics (line 2073)]: Done computing diagnostics
| metric | val | var | |
|---|---|---|---|
| 52 | model_coef | 0.998308 | intercept |
| 53 | model_coef | -0.000021 | _is_na_gender[T.True] |
| 54 | model_coef | -0.212995 | age_group[T.25-34] |
| 55 | model_coef | -0.440444 | age_group[T.35-44] |
| 56 | model_coef | -0.545756 | age_group[T.45+] |
| 57 | model_coef | -0.188264 | gender[Female] |
| 58 | model_coef | 0.181577 | gender[Male] |
| 59 | model_coef | -0.000021 | gender[_NA] |
| 60 | model_coef | -0.570540 | income |
In this setting, income was treated as a numeric variable, with no transformations (e.g.: bucketing) on it. Regardless of the transformations, the model matrix made sure to turn the gender and age_group into dummy variables (including a column for NA).
Next we can fit a simple transformation.
Let's say we wanted to bucket age_groups groups that are smaller than 25% of the data, and use different bucketing on income, here is how we'd do it:
from balance.util import fct_lump, quantize
transformations = {
"age_group": lambda x: fct_lump(x, 0.25),
"gender": lambda x: x,
"income": lambda x: quantize(x.fillna(x.mean()), q=3),
}
adjusted = sample_with_target.adjust(
# method="ipw",
transformations=transformations,
# formula=formula,
# penalty_factor=penalty_factor,
# max_de=None,
)
adj_diag = adjusted.diagnostics()
adj_diag.query("metric == 'model_coef'")
INFO (2026-02-21 04:47:06,294) [ipw/ipw (line 703)]: Starting ipw function
INFO (2026-02-21 04:47:06,296) [adjustment/apply_transformations (line 433)]: Adding the variables: []
INFO (2026-02-21 04:47:06,296) [adjustment/apply_transformations (line 434)]: Transforming the variables: ['age_group', 'gender', 'income']
INFO (2026-02-21 04:47:06,303) [adjustment/apply_transformations (line 469)]: Final variables in output: ['age_group', 'gender', 'income']
INFO (2026-02-21 04:47:06,311) [ipw/ipw (line 738)]: Building model matrix
INFO (2026-02-21 04:47:06,421) [ipw/ipw (line 764)]: The formula used to build the model matrix: ['income + gender + age_group + _is_na_gender']
INFO (2026-02-21 04:47:06,421) [ipw/ipw (line 767)]: The number of columns in the model matrix: 8
INFO (2026-02-21 04:47:06,422) [ipw/ipw (line 768)]: The number of rows in the model matrix: 11000
INFO (2026-02-21 04:47:21,188) [ipw/ipw (line 990)]: Done with sklearn
INFO (2026-02-21 04:47:21,189) [ipw/ipw (line 992)]: max_de: None
INFO (2026-02-21 04:47:21,190) [ipw/ipw (line 1014)]: Starting model selection
INFO (2026-02-21 04:47:21,192) [ipw/ipw (line 1047)]: Chosen lambda: 0.11811067639400605
INFO (2026-02-21 04:47:21,193) [ipw/ipw (line 1065)]: Proportion null deviance explained 0.0942012400003771
WARNING (2026-02-21 04:47:21,194) [ipw/ipw (line 1073)]: The propensity model has low fraction null deviance explained (0.0942012400003771). Results may not be accurate
INFO (2026-02-21 04:47:21,201) [sample_class/diagnostics (line 1827)]: Starting computation of diagnostics of the fitting
INFO (2026-02-21 04:47:21,527) [sample_class/diagnostics (line 2073)]: Done computing diagnostics
| metric | val | var | |
|---|---|---|---|
| 52 | model_coef | -0.326556 | intercept |
| 53 | model_coef | 0.031655 | _is_na_gender[T.True] |
| 54 | model_coef | -0.182093 | age_group[T.35-44] |
| 55 | model_coef | 0.098831 | age_group[T._lumped_other] |
| 56 | model_coef | 0.241560 | gender[T.Male] |
| 57 | model_coef | 0.031655 | gender[T._NA] |
| 58 | model_coef | 0.198958 | income[Interval(-0.0009997440000000001, 4.194,... |
| 59 | model_coef | -0.283196 | income[Interval(13.693, 128.536, closed='right')] |
| 60 | model_coef | 0.048154 | income[Interval(4.194, 13.693, closed='right')] |
As we can see - we managed to change the bucket sizes of income to have only 3 buckets, and we lumped the age_group to two groups (and collapsed together "small" buckets into the _lumped_other bucket).
Lastly, notice that if we omit a variable from transformations, it will not be available for the model construction (This behavior might change in the future).
transformations = {
# "age_group": lambda x: fct_lump(x, 0.25),
"gender": lambda x: x,
# "income": lambda x: quantize(x.fillna(x.mean()), q=3),
}
adjusted = sample_with_target.adjust(
# method="ipw",
transformations=transformations,
# formula=formula,
# penalty_factor=penalty_factor,
# max_de=None,
)
adj_diag = adjusted.diagnostics()
adj_diag.query("metric == 'model_coef'")
INFO (2026-02-21 04:47:21,544) [ipw/ipw (line 703)]: Starting ipw function
INFO (2026-02-21 04:47:21,545) [adjustment/apply_transformations (line 433)]: Adding the variables: []
INFO (2026-02-21 04:47:21,546) [adjustment/apply_transformations (line 434)]: Transforming the variables: ['gender']
WARNING (2026-02-21 04:47:21,547) [adjustment/apply_transformations (line 466)]: Dropping the variables: ['age_group', 'income']
INFO (2026-02-21 04:47:21,547) [adjustment/apply_transformations (line 469)]: Final variables in output: ['gender']
INFO (2026-02-21 04:47:21,550) [ipw/ipw (line 738)]: Building model matrix
INFO (2026-02-21 04:47:21,596) [ipw/ipw (line 764)]: The formula used to build the model matrix: ['gender + _is_na_gender']
INFO (2026-02-21 04:47:21,596) [ipw/ipw (line 767)]: The number of columns in the model matrix: 4
INFO (2026-02-21 04:47:21,597) [ipw/ipw (line 768)]: The number of rows in the model matrix: 11000
INFO (2026-02-21 04:47:31,788) [ipw/ipw (line 990)]: Done with sklearn
INFO (2026-02-21 04:47:31,790) [ipw/ipw (line 992)]: max_de: None
INFO (2026-02-21 04:47:31,790) [ipw/ipw (line 1014)]: Starting model selection
INFO (2026-02-21 04:47:31,793) [ipw/ipw (line 1047)]: Chosen lambda: 0.20570886693214954
INFO (2026-02-21 04:47:31,794) [ipw/ipw (line 1065)]: Proportion null deviance explained 0.02648728826600144
WARNING (2026-02-21 04:47:31,795) [ipw/ipw (line 1073)]: The propensity model has low fraction null deviance explained (0.02648728826600144). Results may not be accurate
INFO (2026-02-21 04:47:31,801) [sample_class/diagnostics (line 1827)]: Starting computation of diagnostics of the fitting
INFO (2026-02-21 04:47:32,122) [sample_class/diagnostics (line 2073)]: Done computing diagnostics
| metric | val | var | |
|---|---|---|---|
| 52 | model_coef | -0.035328 | intercept |
| 53 | model_coef | 0.001072 | _is_na_gender[T.True] |
| 54 | model_coef | -0.141643 | gender[Female] |
| 55 | model_coef | 0.136137 | gender[Male] |
| 56 | model_coef | 0.001072 | gender[_NA] |
As we can see, only gender was included in the model.
# TODO: add more examples about how add_na works
# TODO: add more examples about rare values in categorical variables and how they are grouped together.
Creating new variables¶
In the next example we will create several new transformations of income.
The info gives information on which variables were added, which were transformed, and what is the final variables in the output.
The x in the lambda function can have one of two meanings:
- When the keys in the dict match the exact names of the variables in the DataFrame (e.g.: "income"), then the lambda function treats x as the pandas.Series of that variable.
- If the name of the key does NOT exist in the DataFrame (e.g.: "income_squared"), then x will become the DataFrame of the data.
from balance.util import fct_lump, quantize
transformations = {
"age_group": lambda x: x,
"gender": lambda x: x,
"income": lambda x: x,
"income_squared": lambda x: x.income**2,
"income_buckets": lambda x: quantize(x.income.fillna(x.income.mean()), q=3),
}
adjusted = sample_with_target.adjust(
# method="ipw",
transformations=transformations,
# formula=formula,
# penalty_factor=penalty_factor,
# max_de=None,
)
adj_diag = adjusted.diagnostics()
adj_diag.query("metric == 'model_coef'")
INFO (2026-02-21 04:47:32,143) [ipw/ipw (line 703)]: Starting ipw function
INFO (2026-02-21 04:47:32,145) [adjustment/apply_transformations (line 433)]: Adding the variables: ['income_squared', 'income_buckets']
INFO (2026-02-21 04:47:32,146) [adjustment/apply_transformations (line 434)]: Transforming the variables: ['age_group', 'gender', 'income']
INFO (2026-02-21 04:47:32,151) [adjustment/apply_transformations (line 469)]: Final variables in output: ['income_squared', 'income_buckets', 'age_group', 'gender', 'income']
INFO (2026-02-21 04:47:32,163) [ipw/ipw (line 738)]: Building model matrix
INFO (2026-02-21 04:47:32,277) [ipw/ipw (line 764)]: The formula used to build the model matrix: ['income_squared + income_buckets + income + gender + age_group + _is_na_gender']
INFO (2026-02-21 04:47:32,278) [ipw/ipw (line 767)]: The number of columns in the model matrix: 11
INFO (2026-02-21 04:47:32,278) [ipw/ipw (line 768)]: The number of rows in the model matrix: 11000
INFO (2026-02-21 04:47:52,378) [ipw/ipw (line 990)]: Done with sklearn
INFO (2026-02-21 04:47:52,379) [ipw/ipw (line 992)]: max_de: None
INFO (2026-02-21 04:47:52,380) [ipw/ipw (line 1014)]: Starting model selection
INFO (2026-02-21 04:47:52,385) [ipw/ipw (line 1047)]: Chosen lambda: 0.043506507030756265
INFO (2026-02-21 04:47:52,386) [ipw/ipw (line 1065)]: Proportion null deviance explained 0.17222993109973506
INFO (2026-02-21 04:47:52,394) [sample_class/diagnostics (line 1827)]: Starting computation of diagnostics of the fitting
INFO (2026-02-21 04:47:52,718) [sample_class/diagnostics (line 2073)]: Done computing diagnostics
| metric | val | var | |
|---|---|---|---|
| 52 | model_coef | 0.412704 | intercept |
| 53 | model_coef | 0.044661 | _is_na_gender[T.True] |
| 54 | model_coef | -0.194322 | age_group[T.25-34] |
| 55 | model_coef | -0.421090 | age_group[T.35-44] |
| 56 | model_coef | -0.521683 | age_group[T.45+] |
| 57 | model_coef | 0.326123 | gender[T.Male] |
| 58 | model_coef | 0.044661 | gender[T._NA] |
| 59 | model_coef | -0.264665 | income |
| 60 | model_coef | 0.115075 | income_buckets[Interval(-0.0009997440000000001... |
| 61 | model_coef | -0.165803 | income_buckets[Interval(13.693, 128.536, close... |
| 62 | model_coef | 0.033703 | income_buckets[Interval(4.194, 13.693, closed=... |
| 63 | model_coef | -0.186473 | income_squared |
Formula¶
The formula can accept a list of strings indicating how to combine the transformed variables together. It follows the formula notation from patsy.
For example, we can have an interaction between age_group and gender:
from balance.util import fct_lump_by, quantize
transformations = {
"age_group": lambda x: x,
"gender": lambda x: x,
"income": lambda x: quantize(x.fillna(x.mean()), q=20),
}
formula = ["age_group * gender"]
# the penalty is per elemnt in the list of formula:
# penalty_factor = [0.1, 0.1, 0.1]
adjusted = sample_with_target.adjust(
method="ipw",
transformations=transformations,
formula=formula,
# penalty_factor=penalty_factor,
# max_de=None,
)
adj_diag = adjusted.diagnostics()
adj_diag.query("metric == 'model_coef'")
INFO (2026-02-21 04:47:52,738) [ipw/ipw (line 703)]: Starting ipw function
INFO (2026-02-21 04:47:52,740) [adjustment/apply_transformations (line 433)]: Adding the variables: []
INFO (2026-02-21 04:47:52,740) [adjustment/apply_transformations (line 434)]: Transforming the variables: ['age_group', 'gender', 'income']
INFO (2026-02-21 04:47:52,745) [adjustment/apply_transformations (line 469)]: Final variables in output: ['age_group', 'gender', 'income']
INFO (2026-02-21 04:47:52,754) [ipw/ipw (line 738)]: Building model matrix
INFO (2026-02-21 04:47:52,832) [ipw/ipw (line 764)]: The formula used to build the model matrix: ['age_group * gender']
INFO (2026-02-21 04:47:52,832) [ipw/ipw (line 767)]: The number of columns in the model matrix: 12
INFO (2026-02-21 04:47:52,833) [ipw/ipw (line 768)]: The number of rows in the model matrix: 11000
INFO (2026-02-21 04:48:10,162) [ipw/ipw (line 990)]: Done with sklearn
INFO (2026-02-21 04:48:10,163) [ipw/ipw (line 992)]: max_de: None
INFO (2026-02-21 04:48:10,163) [ipw/ipw (line 1014)]: Starting model selection
INFO (2026-02-21 04:48:10,166) [ipw/ipw (line 1047)]: Chosen lambda: 0.0894967426547247
INFO (2026-02-21 04:48:10,167) [ipw/ipw (line 1065)]: Proportion null deviance explained 0.11496433010847928
INFO (2026-02-21 04:48:10,173) [sample_class/diagnostics (line 1827)]: Starting computation of diagnostics of the fitting
INFO (2026-02-21 04:48:10,495) [sample_class/diagnostics (line 2073)]: Done computing diagnostics
| metric | val | var | |
|---|---|---|---|
| 52 | model_coef | -0.349343 | intercept |
| 53 | model_coef | 0.334719 | age_group[18-24] |
| 54 | model_coef | 0.005834 | age_group[25-34] |
| 55 | model_coef | -0.160262 | age_group[35-44] |
| 56 | model_coef | -0.280376 | age_group[45+] |
| 57 | model_coef | 0.031766 | age_group[T.25-34]:gender[T.Male] |
| 58 | model_coef | 0.016422 | age_group[T.25-34]:gender[T._NA] |
| 59 | model_coef | -0.037757 | age_group[T.35-44]:gender[T.Male] |
| 60 | model_coef | -0.046515 | age_group[T.35-44]:gender[T._NA] |
| 61 | model_coef | -0.032210 | age_group[T.45+]:gender[T.Male] |
| 62 | model_coef | -0.042490 | age_group[T.45+]:gender[T._NA] |
| 63 | model_coef | 0.272436 | gender[T.Male] |
| 64 | model_coef | 0.062867 | gender[T._NA] |
As we can see, the formula makes it so that we have combinations of age_group and gender, as well as a main effects of age_group and gender. Since income was not in the formula, it is not included in the model.
descriptive_stats with formulas¶
You can also use formulas when computing descriptive statistics to control which terms or dummy variables are included in the summary. This is helpful when you want summary statistics for a subset of columns or for specific categorical expansions.
from balance.stats_and_plots.weighted_stats import descriptive_stats
import pandas as pd
df = pd.DataFrame({"num": [1, 2, 3], "group": ["a", "b", "a"]})
# Only summarize the numeric column
descriptive_stats(df, stat="mean", formula="num")
# Summarize the categorical column via its dummy variables
descriptive_stats(df, stat="mean", formula="group")
| group[a] | group[b] | |
|---|---|---|
| 0 | 0.666667 | 0.333333 |
Formula and penalty_factor¶
The formula can be provided as several strings, and then the penalty factor can indicate how much the model should focus to adjust to that element of the formula. Larger penalty factors means that element will be less corrected.
The next two examples shows how in one case we focus on correcting for income, and in the second case we focus to correct for age and gender.
transformations = {
"age_group": lambda x: x,
"gender": lambda x: x,
"income": lambda x: x,
}
formula = ["age_group + gender", "income"]
# the penalty is per elemnt in the list of formula:
penalty_factor = [10, 0.1]
adjusted = sample_with_target.adjust(
method="ipw",
transformations=transformations,
formula=formula,
penalty_factor=penalty_factor,
# max_de=None,
)
adj_diag = adjusted.diagnostics()
adj_diag.query("metric == 'model_coef'")
INFO (2026-02-21 04:48:10,533) [ipw/ipw (line 703)]: Starting ipw function
INFO (2026-02-21 04:48:10,535) [adjustment/apply_transformations (line 433)]: Adding the variables: []
INFO (2026-02-21 04:48:10,536) [adjustment/apply_transformations (line 434)]: Transforming the variables: ['age_group', 'gender', 'income']
INFO (2026-02-21 04:48:10,537) [adjustment/apply_transformations (line 469)]: Final variables in output: ['age_group', 'gender', 'income']
INFO (2026-02-21 04:48:10,543) [ipw/ipw (line 738)]: Building model matrix
INFO (2026-02-21 04:48:10,622) [ipw/ipw (line 764)]: The formula used to build the model matrix: ['age_group + gender', 'income']
INFO (2026-02-21 04:48:10,622) [ipw/ipw (line 767)]: The number of columns in the model matrix: 7
INFO (2026-02-21 04:48:10,623) [ipw/ipw (line 768)]: The number of rows in the model matrix: 11000
INFO (2026-02-21 04:48:42,117) [ipw/ipw (line 990)]: Done with sklearn
INFO (2026-02-21 04:48:42,118) [ipw/ipw (line 992)]: max_de: None
INFO (2026-02-21 04:48:42,119) [ipw/ipw (line 1014)]: Starting model selection
INFO (2026-02-21 04:48:42,122) [ipw/ipw (line 1047)]: Chosen lambda: 0.0009460271806598614
INFO (2026-02-21 04:48:42,122) [ipw/ipw (line 1065)]: Proportion null deviance explained 0.1727205955628286
INFO (2026-02-21 04:48:42,130) [sample_class/diagnostics (line 1827)]: Starting computation of diagnostics of the fitting
INFO (2026-02-21 04:48:42,453) [sample_class/diagnostics (line 2073)]: Done computing diagnostics
| metric | val | var | |
|---|---|---|---|
| 52 | model_coef | 0.243947 | intercept |
| 53 | model_coef | 3.240641 | age_group[18-24] |
| 54 | model_coef | 0.393603 | age_group[25-34] |
| 55 | model_coef | -1.760098 | age_group[35-44] |
| 56 | model_coef | -2.917924 | age_group[45+] |
| 57 | model_coef | 2.596568 | gender[T.Male] |
| 58 | model_coef | 0.486109 | gender[T._NA] |
| 59 | model_coef | -0.073752 | income |
The above example corrected more to income. As we can see, age and gender got 0 correction (since their penalty was so high). Let's now over correct for age and gender:
transformations = {
"age_group": lambda x: x,
"gender": lambda x: x,
"income": lambda x: x,
}
formula = ["age_group + gender", "income"]
# the penalty is per elemnt in the list of formula:
penalty_factor = [0.1, 10] # this is flipped
adjusted = sample_with_target.adjust(
method="ipw",
transformations=transformations,
formula=formula,
penalty_factor=penalty_factor,
# max_de=None,
)
adj_diag = adjusted.diagnostics()
adj_diag.query("metric == 'model_coef'")
INFO (2026-02-21 04:48:42,471) [ipw/ipw (line 703)]: Starting ipw function
INFO (2026-02-21 04:48:42,473) [adjustment/apply_transformations (line 433)]: Adding the variables: []
INFO (2026-02-21 04:48:42,473) [adjustment/apply_transformations (line 434)]: Transforming the variables: ['age_group', 'gender', 'income']
INFO (2026-02-21 04:48:42,475) [adjustment/apply_transformations (line 469)]: Final variables in output: ['age_group', 'gender', 'income']
INFO (2026-02-21 04:48:42,481) [ipw/ipw (line 738)]: Building model matrix
INFO (2026-02-21 04:48:42,559) [ipw/ipw (line 764)]: The formula used to build the model matrix: ['age_group + gender', 'income']
INFO (2026-02-21 04:48:42,560) [ipw/ipw (line 767)]: The number of columns in the model matrix: 7
INFO (2026-02-21 04:48:42,560) [ipw/ipw (line 768)]: The number of rows in the model matrix: 11000
INFO (2026-02-21 04:49:21,217) [ipw/ipw (line 990)]: Done with sklearn
INFO (2026-02-21 04:49:21,218) [ipw/ipw (line 992)]: max_de: None
INFO (2026-02-21 04:49:21,219) [ipw/ipw (line 1014)]: Starting model selection
INFO (2026-02-21 04:49:21,224) [ipw/ipw (line 1047)]: Chosen lambda: 0.001
INFO (2026-02-21 04:49:21,225) [ipw/ipw (line 1065)]: Proportion null deviance explained 0.17304814560907622
INFO (2026-02-21 04:49:21,234) [sample_class/diagnostics (line 1827)]: Starting computation of diagnostics of the fitting
INFO (2026-02-21 04:49:21,555) [sample_class/diagnostics (line 2073)]: Done computing diagnostics
| metric | val | var | |
|---|---|---|---|
| 52 | model_coef | -0.412403 | intercept |
| 53 | model_coef | 0.053595 | age_group[18-24] |
| 54 | model_coef | 0.014833 | age_group[25-34] |
| 55 | model_coef | -0.014770 | age_group[35-44] |
| 56 | model_coef | -0.037396 | age_group[45+] |
| 57 | model_coef | 0.041933 | gender[T.Male] |
| 58 | model_coef | 0.011918 | gender[T._NA] |
| 59 | model_coef | -4.208587 | income |
In the above case, income basically got 0 correction.
We can add two versions of income, and give each of them a higher penalty than the age and gender:
from balance.util import fct_lump_by, quantize
transformations = {
"age_group": lambda x: x,
"gender": lambda x: x,
"income": lambda x: x,
"income_buckets": lambda x: quantize(x.income.fillna(x.income.mean()), q=4),
}
formula = ["age_group + gender", "income", "income_buckets"]
# the penalty is per elemnt in the list of formula:
penalty_factor = [1, 2, 2]
adjusted = sample_with_target.adjust(
method="ipw",
transformations=transformations,
formula=formula,
penalty_factor=penalty_factor,
# max_de=None,
)
adj_diag = adjusted.diagnostics()
adj_diag.query("metric == 'model_coef'")
INFO (2026-02-21 04:49:21,572) [ipw/ipw (line 703)]: Starting ipw function
INFO (2026-02-21 04:49:21,575) [adjustment/apply_transformations (line 433)]: Adding the variables: ['income_buckets']
INFO (2026-02-21 04:49:21,575) [adjustment/apply_transformations (line 434)]: Transforming the variables: ['age_group', 'gender', 'income']
INFO (2026-02-21 04:49:21,580) [adjustment/apply_transformations (line 469)]: Final variables in output: ['income_buckets', 'age_group', 'gender', 'income']
INFO (2026-02-21 04:49:21,590) [ipw/ipw (line 738)]: Building model matrix
INFO (2026-02-21 04:49:21,704) [ipw/ipw (line 764)]: The formula used to build the model matrix: ['age_group + gender', 'income', 'income_buckets']
INFO (2026-02-21 04:49:21,704) [ipw/ipw (line 767)]: The number of columns in the model matrix: 11
INFO (2026-02-21 04:49:21,705) [ipw/ipw (line 768)]: The number of rows in the model matrix: 11000
INFO (2026-02-21 04:49:40,990) [ipw/ipw (line 990)]: Done with sklearn
INFO (2026-02-21 04:49:40,991) [ipw/ipw (line 992)]: max_de: None
INFO (2026-02-21 04:49:40,992) [ipw/ipw (line 1014)]: Starting model selection
INFO (2026-02-21 04:49:40,995) [ipw/ipw (line 1047)]: Chosen lambda: 0.043506507030756265
INFO (2026-02-21 04:49:40,996) [ipw/ipw (line 1065)]: Proportion null deviance explained 0.17297141960904983
INFO (2026-02-21 04:49:41,002) [sample_class/diagnostics (line 1827)]: Starting computation of diagnostics of the fitting
INFO (2026-02-21 04:49:41,326) [sample_class/diagnostics (line 2073)]: Done computing diagnostics
| metric | val | var | |
|---|---|---|---|
| 52 | model_coef | -0.291644 | intercept |
| 53 | model_coef | 0.380432 | age_group[18-24] |
| 54 | model_coef | 0.049269 | age_group[25-34] |
| 55 | model_coef | -0.198208 | age_group[35-44] |
| 56 | model_coef | -0.349693 | age_group[45+] |
| 57 | model_coef | 0.322417 | gender[T.Male] |
| 58 | model_coef | 0.074613 | gender[T._NA] |
| 59 | model_coef | -0.418615 | income |
| 60 | model_coef | 0.217427 | income_buckets[Interval(-0.0009997440000000001... |
| 61 | model_coef | -0.366163 | income_buckets[Interval(17.694, 128.536, close... |
| 62 | model_coef | 0.130635 | income_buckets[Interval(2.53, 8.211, closed='r... |
| 63 | model_coef | -0.050271 | income_buckets[Interval(8.211, 17.694, closed=... |
Another way is to create a formula for several variations of each variable, and give each a penalty of 1. For example:
from balance.util import fct_lump_by, quantize
transformations = {
"age_group": lambda x: x,
"gender": lambda x: x,
"income": lambda x: x,
"income_buckets": lambda x: quantize(x.income.fillna(x.income.mean()), q=4),
}
formula = ["age_group", "gender", "income + income_buckets"]
# the penalty is per elemnt in the list of formula:
penalty_factor = [1, 1, 1]
adjusted = sample_with_target.adjust(
method="ipw",
transformations=transformations,
formula=formula,
penalty_factor=penalty_factor,
# max_de=None,
)
adj_diag = adjusted.diagnostics()
adj_diag.query("metric == 'model_coef'")
INFO (2026-02-21 04:49:41,345) [ipw/ipw (line 703)]: Starting ipw function
INFO (2026-02-21 04:49:41,347) [adjustment/apply_transformations (line 433)]: Adding the variables: ['income_buckets']
INFO (2026-02-21 04:49:41,348) [adjustment/apply_transformations (line 434)]: Transforming the variables: ['age_group', 'gender', 'income']
INFO (2026-02-21 04:49:41,353) [adjustment/apply_transformations (line 469)]: Final variables in output: ['income_buckets', 'age_group', 'gender', 'income']
INFO (2026-02-21 04:49:41,363) [ipw/ipw (line 738)]: Building model matrix
INFO (2026-02-21 04:49:41,477) [ipw/ipw (line 764)]: The formula used to build the model matrix: ['age_group', 'gender', 'income + income_buckets']
INFO (2026-02-21 04:49:41,478) [ipw/ipw (line 767)]: The number of columns in the model matrix: 12
INFO (2026-02-21 04:49:41,479) [ipw/ipw (line 768)]: The number of rows in the model matrix: 11000
INFO (2026-02-21 04:49:57,818) [ipw/ipw (line 990)]: Done with sklearn
INFO (2026-02-21 04:49:57,820) [ipw/ipw (line 992)]: max_de: None
INFO (2026-02-21 04:49:57,820) [ipw/ipw (line 1014)]: Starting model selection
INFO (2026-02-21 04:49:57,824) [ipw/ipw (line 1047)]: Chosen lambda: 0.0894967426547247
INFO (2026-02-21 04:49:57,825) [ipw/ipw (line 1065)]: Proportion null deviance explained 0.172976573763568
INFO (2026-02-21 04:49:57,833) [sample_class/diagnostics (line 1827)]: Starting computation of diagnostics of the fitting
INFO (2026-02-21 04:49:58,153) [sample_class/diagnostics (line 2073)]: Done computing diagnostics
| metric | val | var | |
|---|---|---|---|
| 52 | model_coef | 0.082009 | intercept |
| 53 | model_coef | 0.328090 | age_group[18-24] |
| 54 | model_coef | 0.039778 | age_group[25-34] |
| 55 | model_coef | -0.175993 | age_group[35-44] |
| 56 | model_coef | -0.296406 | age_group[45+] |
| 57 | model_coef | -0.163344 | gender[Female] |
| 58 | model_coef | 0.159121 | gender[Male] |
| 59 | model_coef | 0.000064 | gender[_NA] |
| 60 | model_coef | -0.258803 | income |
| 61 | model_coef | 0.122206 | income_buckets[Interval(-0.0009997440000000001... |
| 62 | model_coef | -0.213231 | income_buckets[Interval(17.694, 128.536, close... |
| 63 | model_coef | 0.076380 | income_buckets[Interval(2.53, 8.211, closed='r... |
| 64 | model_coef | -0.024929 | income_buckets[Interval(8.211, 17.694, closed=... |
# Defaults from the package
adjusted = sample_with_target.adjust(
# max_de=None,
)
print(adjusted.summary())
print(adjusted.outcomes().summary())
adjusted.covars().plot(library = "seaborn", dist_type = "kde")
INFO (2026-02-21 04:49:58,171) [ipw/ipw (line 703)]: Starting ipw function
INFO (2026-02-21 04:49:58,173) [adjustment/apply_transformations (line 433)]: Adding the variables: []
INFO (2026-02-21 04:49:58,174) [adjustment/apply_transformations (line 434)]: Transforming the variables: ['gender', 'age_group', 'income']
INFO (2026-02-21 04:49:58,182) [adjustment/apply_transformations (line 469)]: Final variables in output: ['gender', 'age_group', 'income']
INFO (2026-02-21 04:49:58,191) [ipw/ipw (line 738)]: Building model matrix
INFO (2026-02-21 04:49:58,301) [ipw/ipw (line 764)]: The formula used to build the model matrix: ['income + gender + age_group + _is_na_gender']
INFO (2026-02-21 04:49:58,302) [ipw/ipw (line 767)]: The number of columns in the model matrix: 16
INFO (2026-02-21 04:49:58,302) [ipw/ipw (line 768)]: The number of rows in the model matrix: 11000
INFO (2026-02-21 04:50:15,127) [ipw/ipw (line 990)]: Done with sklearn
INFO (2026-02-21 04:50:15,128) [ipw/ipw (line 992)]: max_de: None
INFO (2026-02-21 04:50:15,129) [ipw/ipw (line 1014)]: Starting model selection
INFO (2026-02-21 04:50:15,131) [ipw/ipw (line 1047)]: Chosen lambda: 0.041158338186664825
INFO (2026-02-21 04:50:15,132) [ipw/ipw (line 1065)]: Proportion null deviance explained 0.172637976731583
Adjustment details:
method: ipw
weight trimming mean ratio: 20
Covariate diagnostics:
Covar ASMD reduction: 63.4%
Covar ASMD (7 variables): 0.327 -> 0.120
Covar mean KLD reduction: 92.3%
Covar mean KLD (3 variables): 0.157 -> 0.012
Weight diagnostics:
design effect (Deff): 1.880
effective sample size proportion (ESSP): 0.532
effective sample size (ESS): 531.9
Outcome weighted means:
happiness
source
self 53.295
target 56.278
unadjusted 48.559
Model performance: Model proportion deviance explained: 0.173
1 outcomes: ['happiness']
Mean outcomes (with 95% confidence intervals):
source self target unadjusted self_ci target_ci unadjusted_ci
happiness 53.295 56.278 48.559 (52.096, 54.495) (55.961, 56.595) (47.669, 49.449)
Weights impact on outcomes (t_test):
mean_yw0 mean_yw1 mean_diff diff_ci_lower diff_ci_upper t_stat p_value n
outcome
happiness 48.559 53.295 4.736 1.312 8.161 2.714 0.007 1000.0
Response rates (relative to number of respondents in sample):
happiness
n 1000.0
% 100.0
Response rates (relative to notnull rows in the target):
happiness
n 1000.0
% 10.0
Response rates (in the target):
happiness
n 10000.0
% 100.0
# No transformations at all
# transformations = None is just like using:
# transformations = {
# "age_group": lambda x: x,
# "gender": lambda x: x,
# "income": lambda x: x,
# }
adjusted = sample_with_target.adjust(
method="ipw",
transformations=None,
# formula=formula,
# penalty_factor=penalty_factor,
# max_de=None,
)
print(adjusted.summary())
print(adjusted.outcomes().summary())
adjusted.covars().plot(library = "seaborn", dist_type = "kde")
# slightly smaller design effect, slightly better ASMD reduction.
INFO (2026-02-21 04:50:16,638) [ipw/ipw (line 703)]: Starting ipw function
INFO (2026-02-21 04:50:16,639) [ipw/ipw (line 738)]: Building model matrix
INFO (2026-02-21 04:50:16,720) [ipw/ipw (line 764)]: The formula used to build the model matrix: ['income + gender + age_group + _is_na_gender']
INFO (2026-02-21 04:50:16,720) [ipw/ipw (line 767)]: The number of columns in the model matrix: 8
INFO (2026-02-21 04:50:16,721) [ipw/ipw (line 768)]: The number of rows in the model matrix: 11000
INFO (2026-02-21 04:50:32,908) [ipw/ipw (line 990)]: Done with sklearn
INFO (2026-02-21 04:50:32,909) [ipw/ipw (line 992)]: max_de: None
INFO (2026-02-21 04:50:32,910) [ipw/ipw (line 1014)]: Starting model selection
INFO (2026-02-21 04:50:32,913) [ipw/ipw (line 1047)]: Chosen lambda: 0.0368353720078807
INFO (2026-02-21 04:50:32,914) [ipw/ipw (line 1065)]: Proportion null deviance explained 0.17354102148345973
Adjustment details:
method: ipw
weight trimming mean ratio: 20
Covariate diagnostics:
Covar ASMD reduction: 68.5%
Covar ASMD (7 variables): 0.327 -> 0.103
Covar mean KLD reduction: 94.1%
Covar mean KLD (3 variables): 0.157 -> 0.009
Weight diagnostics:
design effect (Deff): 2.087
effective sample size proportion (ESSP): 0.479
effective sample size (ESS): 479.1
Outcome weighted means:
happiness
source
self 53.731
target 56.278
unadjusted 48.559
Model performance: Model proportion deviance explained: 0.174
1 outcomes: ['happiness']
Mean outcomes (with 95% confidence intervals):
source self target unadjusted self_ci target_ci unadjusted_ci
happiness 53.731 56.278 48.559 (52.513, 54.949) (55.961, 56.595) (47.669, 49.449)
Weights impact on outcomes (t_test):
mean_yw0 mean_yw1 mean_diff diff_ci_lower diff_ci_upper t_stat p_value n
outcome
happiness 48.559 53.731 5.172 1.461 8.883 2.735 0.006 1000.0
Response rates (relative to number of respondents in sample):
happiness
n 1000.0
% 100.0
Response rates (relative to notnull rows in the target):
happiness
n 1000.0
% 10.0
Response rates (in the target):
happiness
n 10000.0
% 100.0
# No transformations at all
transformations = None
# But passing a squared term of income to the formula:
formula = ["age_group + gender + income + income**2"]
# the penalty is per elemnt in the list of formula:
# penalty_factor = [1]
adjusted = sample_with_target.adjust(
method="ipw",
transformations=transformations,
formula=formula,
# penalty_factor=penalty_factor,
# max_de=None,
)
print(adjusted.summary())
print(adjusted.outcomes().summary())
adjusted.covars().plot(library = "seaborn", dist_type = "kde")
# Adding income**2 to the formula led to lower Deff but also lower ASMD reduction.
INFO (2026-02-21 04:50:34,562) [ipw/ipw (line 703)]: Starting ipw function
INFO (2026-02-21 04:50:34,564) [ipw/ipw (line 738)]: Building model matrix
INFO (2026-02-21 04:50:34,643) [ipw/ipw (line 764)]: The formula used to build the model matrix: ['age_group + gender + income + income**2']
INFO (2026-02-21 04:50:34,643) [ipw/ipw (line 767)]: The number of columns in the model matrix: 7
INFO (2026-02-21 04:50:34,644) [ipw/ipw (line 768)]: The number of rows in the model matrix: 11000
INFO (2026-02-21 04:50:50,255) [ipw/ipw (line 990)]: Done with sklearn
INFO (2026-02-21 04:50:50,256) [ipw/ipw (line 992)]: max_de: None
INFO (2026-02-21 04:50:50,257) [ipw/ipw (line 1014)]: Starting model selection
INFO (2026-02-21 04:50:50,260) [ipw/ipw (line 1047)]: Chosen lambda: 0.0574164245593571
INFO (2026-02-21 04:50:50,260) [ipw/ipw (line 1065)]: Proportion null deviance explained 0.172963421441365
Adjustment details:
method: ipw
weight trimming mean ratio: 20
Covariate diagnostics:
Covar ASMD reduction: 60.7%
Covar ASMD (7 variables): 0.327 -> 0.128
Covar mean KLD reduction: 93.6%
Covar mean KLD (3 variables): 0.157 -> 0.010
Weight diagnostics:
design effect (Deff): 1.925
effective sample size proportion (ESSP): 0.519
effective sample size (ESS): 519.5
Outcome weighted means:
happiness
source
self 53.259
target 56.278
unadjusted 48.559
Model performance: Model proportion deviance explained: 0.173
1 outcomes: ['happiness']
Mean outcomes (with 95% confidence intervals):
source self target unadjusted self_ci target_ci unadjusted_ci
happiness 53.259 56.278 48.559 (52.073, 54.446) (55.961, 56.595) (47.669, 49.449)
Weights impact on outcomes (t_test):
mean_yw0 mean_yw1 mean_diff diff_ci_lower diff_ci_upper t_stat p_value n
outcome
happiness 48.559 53.259 4.701 1.289 8.112 2.704 0.007 1000.0
Response rates (relative to number of respondents in sample):
happiness
n 1000.0
% 100.0
Response rates (relative to notnull rows in the target):
happiness
n 1000.0
% 10.0
Response rates (in the target):
happiness
n 10000.0
% 100.0
transformations = {
"age_group": lambda x: x,
"gender": lambda x: x,
"income": lambda x: x,
"income_buckets": lambda x: quantize(x.income.fillna(x.income.mean()), q=20),
}
formula = ["age_group + gender", "income_buckets"]
# the penalty is per elemnt in the list of formula:
penalty_factor = [1, 0.1]
adjusted = sample_with_target.adjust(
method="ipw",
transformations=transformations,
formula=formula,
penalty_factor=penalty_factor,
# max_de=None,
)
print(adjusted.summary())
print(adjusted.outcomes().summary())
adjusted.covars().plot(library = "seaborn", dist_type = "kde")
# By adding income_buckets and using it instead of income, as well as putting more weight in it in terms of penalty
# we managed to correct income quite well, but at the expense of age and gender.
INFO (2026-02-21 04:50:51,775) [ipw/ipw (line 703)]: Starting ipw function
INFO (2026-02-21 04:50:51,777) [adjustment/apply_transformations (line 433)]: Adding the variables: ['income_buckets']
INFO (2026-02-21 04:50:51,778) [adjustment/apply_transformations (line 434)]: Transforming the variables: ['age_group', 'gender', 'income']
INFO (2026-02-21 04:50:51,783) [adjustment/apply_transformations (line 469)]: Final variables in output: ['income_buckets', 'age_group', 'gender', 'income']
INFO (2026-02-21 04:50:51,795) [ipw/ipw (line 738)]: Building model matrix
INFO (2026-02-21 04:50:51,908) [ipw/ipw (line 764)]: The formula used to build the model matrix: ['age_group + gender', 'income_buckets']
INFO (2026-02-21 04:50:51,909) [ipw/ipw (line 767)]: The number of columns in the model matrix: 26
INFO (2026-02-21 04:50:51,909) [ipw/ipw (line 768)]: The number of rows in the model matrix: 11000
INFO (2026-02-21 04:51:19,290) [ipw/ipw (line 990)]: Done with sklearn
INFO (2026-02-21 04:51:19,291) [ipw/ipw (line 992)]: max_de: None
INFO (2026-02-21 04:51:19,291) [ipw/ipw (line 1014)]: Starting model selection
INFO (2026-02-21 04:51:19,296) [ipw/ipw (line 1047)]: Chosen lambda: 0.09460271806598614
INFO (2026-02-21 04:51:19,297) [ipw/ipw (line 1065)]: Proportion null deviance explained 0.17680429430940325
Adjustment details:
method: ipw
weight trimming mean ratio: 20
Covariate diagnostics:
Covar ASMD reduction: 69.9%
Covar ASMD (7 variables): 0.327 -> 0.098
Covar mean KLD reduction: 88.6%
Covar mean KLD (3 variables): 0.157 -> 0.018
Weight diagnostics:
design effect (Deff): 2.390
effective sample size proportion (ESSP): 0.418
effective sample size (ESS): 418.4
Outcome weighted means:
happiness
source
self 52.287
target 56.278
unadjusted 48.559
Model performance: Model proportion deviance explained: 0.177
1 outcomes: ['happiness']
Mean outcomes (with 95% confidence intervals):
source self target unadjusted self_ci target_ci unadjusted_ci
happiness 52.287 56.278 48.559 (51.058, 53.517) (55.961, 56.595) (47.669, 49.449)
Weights impact on outcomes (t_test):
mean_yw0 mean_yw1 mean_diff diff_ci_lower diff_ci_upper t_stat p_value n
outcome
happiness 48.559 52.287 3.728 -0.21 7.666 1.858 0.063 1000.0
Response rates (relative to number of respondents in sample):
happiness
n 1000.0
% 100.0
Response rates (relative to notnull rows in the target):
happiness
n 1000.0
% 10.0
Response rates (in the target):
happiness
n 10000.0
% 100.0
CBPS¶
Let's see if we can improve on CBPS a bit.
# Defaults from the package
adjusted = sample_with_target.adjust(
method = "cbps",
# max_de=None,
)
print(adjusted.summary())
print(adjusted.outcomes().summary())
adjusted.covars().plot(library = "seaborn", dist_type = "kde")
# CBPS already corrects a lot. Let's see if we can make it correct a tiny bit more.
INFO (2026-02-21 04:51:20,793) [cbps/cbps (line 537)]: Starting cbps function
INFO (2026-02-21 04:51:20,796) [adjustment/apply_transformations (line 433)]: Adding the variables: []
INFO (2026-02-21 04:51:20,796) [adjustment/apply_transformations (line 434)]: Transforming the variables: ['gender', 'age_group', 'income']
INFO (2026-02-21 04:51:20,804) [adjustment/apply_transformations (line 469)]: Final variables in output: ['gender', 'age_group', 'income']
INFO (2026-02-21 04:51:20,923) [cbps/cbps (line 588)]: The formula used to build the model matrix: ['income + gender + age_group + _is_na_gender']
INFO (2026-02-21 04:51:20,925) [cbps/cbps (line 599)]: The number of columns in the model matrix: 16
INFO (2026-02-21 04:51:20,925) [cbps/cbps (line 600)]: The number of rows in the model matrix: 11000
INFO (2026-02-21 04:51:20,935) [cbps/cbps (line 669)]: Finding initial estimator for GMM optimization
INFO (2026-02-21 04:51:21,079) [cbps/cbps (line 696)]: Finding initial estimator for GMM optimization that minimizes the balance loss
INFO (2026-02-21 04:51:22,568) [cbps/cbps (line 732)]: Running GMM optimization
INFO (2026-02-21 04:51:24,158) [cbps/cbps (line 859)]: Done cbps function
Adjustment details:
method: cbps
Covariate diagnostics:
Covar ASMD reduction: 77.4%
Covar ASMD (7 variables): 0.327 -> 0.074
Covar mean KLD reduction: 98.2%
Covar mean KLD (3 variables): 0.157 -> 0.003
Weight diagnostics:
design effect (Deff): 2.754
effective sample size proportion (ESSP): 0.363
effective sample size (ESS): 363.1
Outcome weighted means:
happiness
source
self 54.366
target 56.278
unadjusted 48.559
1 outcomes: ['happiness']
Mean outcomes (with 95% confidence intervals):
source self target unadjusted self_ci target_ci unadjusted_ci
happiness 54.366 56.278 48.559 (53.003, 55.73) (55.961, 56.595) (47.669, 49.449)
Weights impact on outcomes (t_test):
mean_yw0 mean_yw1 mean_diff diff_ci_lower diff_ci_upper t_stat p_value n
outcome
happiness 48.559 54.366 5.807 0.911 10.703 2.328 0.02 1000.0
Response rates (relative to number of respondents in sample):
happiness
n 1000.0
% 100.0
Response rates (relative to notnull rows in the target):
happiness
n 1000.0
% 10.0
Response rates (in the target):
happiness
n 10000.0
% 100.0
import numpy as np
# No transformations at all
transformations = {
"age_group": lambda x: x,
"gender": lambda x: x,
# "income": lambda x: x,
"income_log": lambda x: np.log(x.income.fillna(x.income.mean())),
"income_buckets": lambda x: quantize(x.income.fillna(x.income.mean()), q=5),
}
formula = ["age_group + gender + income_log * income_buckets"]
adjusted = sample_with_target.adjust(
method="cbps",
transformations=transformations,
formula=formula,
# penalty_factor=penalty_factor, # CBPS seems to ignore the penalty factor.
# max_de=None,
)
print(adjusted.summary())
print(adjusted.outcomes().summary())
adjusted.covars().plot(library="seaborn", dist_type="kde")
# Trying various transformations gives slightly different results (some effect on the outcome, Deff and ASMD) - but nothing too major here.
INFO (2026-02-21 04:51:25,624) [cbps/cbps (line 537)]: Starting cbps function
INFO (2026-02-21 04:51:25,626) [adjustment/apply_transformations (line 433)]: Adding the variables: ['income_log', 'income_buckets']
INFO (2026-02-21 04:51:25,626) [adjustment/apply_transformations (line 434)]: Transforming the variables: ['age_group', 'gender']
WARNING (2026-02-21 04:51:25,632) [adjustment/apply_transformations (line 466)]: Dropping the variables: ['income']
INFO (2026-02-21 04:51:25,633) [adjustment/apply_transformations (line 469)]: Final variables in output: ['income_log', 'income_buckets', 'age_group', 'gender']
INFO (2026-02-21 04:51:25,754) [cbps/cbps (line 588)]: The formula used to build the model matrix: ['age_group + gender + income_log * income_buckets']
INFO (2026-02-21 04:51:25,756) [cbps/cbps (line 599)]: The number of columns in the model matrix: 15
INFO (2026-02-21 04:51:25,757) [cbps/cbps (line 600)]: The number of rows in the model matrix: 11000
INFO (2026-02-21 04:51:25,767) [cbps/cbps (line 669)]: Finding initial estimator for GMM optimization
INFO (2026-02-21 04:51:25,918) [cbps/cbps (line 696)]: Finding initial estimator for GMM optimization that minimizes the balance loss
INFO (2026-02-21 04:51:27,437) [cbps/cbps (line 732)]: Running GMM optimization
INFO (2026-02-21 04:51:28,895) [cbps/cbps (line 859)]: Done cbps function
Adjustment details:
method: cbps
Covariate diagnostics:
Covar ASMD reduction: 82.1%
Covar ASMD (7 variables): 0.327 -> 0.059
Covar mean KLD reduction: 98.4%
Covar mean KLD (3 variables): 0.157 -> 0.002
Weight diagnostics:
design effect (Deff): 3.030
effective sample size proportion (ESSP): 0.330
effective sample size (ESS): 330.1
Outcome weighted means:
happiness
source
self 54.432
target 56.278
unadjusted 48.559
1 outcomes: ['happiness']
Mean outcomes (with 95% confidence intervals):
source self target unadjusted self_ci target_ci unadjusted_ci
happiness 54.432 56.278 48.559 (53.042, 55.822) (55.961, 56.595) (47.669, 49.449)
Weights impact on outcomes (t_test):
mean_yw0 mean_yw1 mean_diff diff_ci_lower diff_ci_upper t_stat p_value n
outcome
happiness 48.559 54.432 5.873 0.735 11.011 2.243 0.025 1000.0
Response rates (relative to number of respondents in sample):
happiness
n 1000.0
% 100.0
Response rates (relative to notnull rows in the target):
happiness
n 1000.0
% 10.0
Response rates (in the target):
happiness
n 10000.0
% 100.0
# Sessions info
import session_info
session_info.show(html=False, dependencies=True)
----- balance 0.16.1 numpy 2.4.2 pandas 3.0.1 session_info v1.0.1 ----- PIL 12.1.1 anyio NA arrow 1.4.0 asttokens NA attr 25.4.0 attrs 25.4.0 babel 2.18.0 certifi 2026.01.04 charset_normalizer 3.4.4 comm 0.2.3 cycler 0.12.1 cython_runtime NA dateutil 2.9.0.post0 debugpy 1.8.20 decorator 5.2.1 defusedxml 0.7.1 executing 2.2.1 fastjsonschema NA fqdn NA idna 3.11 ipykernel 7.2.0 isoduration NA jedi 0.19.2 jinja2 3.1.6 joblib 1.5.3 json5 0.13.0 jsonpointer 3.0.0 jsonschema 4.26.0 jsonschema_specifications NA jupyter_events 0.12.0 jupyter_server 2.17.0 jupyterlab_server 2.28.0 kiwisolver 1.4.9 lark 1.3.1 markupsafe 3.0.3 matplotlib 3.10.8 matplotlib_inline 0.2.1 mpl_toolkits NA narwhals 2.16.0 nbformat 5.10.4 packaging 26.0 parso 0.8.6 patsy 1.0.2 platformdirs 4.9.2 plotly 6.5.2 prometheus_client NA prompt_toolkit 3.0.52 psutil 7.2.2 pure_eval 0.2.3 pydev_ipython NA pydevconsole NA pydevd 3.2.3 pydevd_file_utils NA pydevd_plugins NA pydevd_tracing NA pygments 2.19.2 pyparsing 3.3.2 pythonjsonlogger NA referencing NA requests 2.32.5 rfc3339_validator 0.1.4 rfc3986_validator 0.1.1 rfc3987_syntax NA rpds NA scipy 1.17.0 seaborn 0.13.2 send2trash NA six 1.17.0 sklearn 1.8.0 sphinxcontrib NA stack_data 0.6.3 statsmodels 0.14.6 threadpoolctl 3.6.0 tornado 6.5.4 traitlets 5.14.3 typing_extensions NA uri_template NA urllib3 2.6.3 wcwidth 0.6.0 webcolors NA websocket 1.9.0 yaml 6.0.3 zmq 27.1.0 zoneinfo NA ----- IPython 9.10.0 jupyter_client 8.8.0 jupyter_core 5.9.1 jupyterlab 4.5.4 notebook 7.5.3 ----- Python 3.12.12 (main, Oct 10 2025, 01:01:16) [GCC 13.3.0] Linux-6.11.0-1018-azure-x86_64-with-glibc2.39 ----- Session information updated at 2026-02-21 04:51